Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933174.1_cds_XP_016479560.1_71091
CDS Infomation

[gene=LOC107800833] [db_xref=GeneID:107800833] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4] [protein_id=XP_016479560.1] [location=complement(join(86910..88075,88169..88623,88842..89263))] [gbkey=CDS]
Sequence

ATGGTTATGTTATTCTTATATCAACTCTCAACCTGTTTCCTCCTAATTTTAGTCATCACA
ATTCCATCATCTTACAGCTTTTTGTTTGAAGGCGAGAGTATAAACTGCGAAGCTGCTTAC
AACTGTGGAAATATACATGGTATTAAGTATCCTTTCTGGGGAGGTAGTGTGCGATCAAGA
CTATGTGGCCGAGACGATTACTTTCTTGAATGCAAAGATAATCTGTCCACTTTGCCTGTT
TTTTCCTTCTCACAAAGAAAATACTCGGGTTATCGACCTTCAAAATTTCATGTACTGTCT
ATTAACGAATCCTCAACTCGAATGAGGATTGTGCATGATAATCTTTGGCATAATGTTTGT
CCAAAATCTTCTTCTTTGTTCAATCTCAACAAGTATAACACCACCTTAATCAACGGTCTC
AGGTACGTCCCTGGAACTAGATTTATAAACATATTCTACGGCTGCAATCCTGAGGTTCTG
TCACAGGTACAGCTTCCAAGCAATATTAATTGTTCTGTGGTAGGAACAACCAACACTGGT
GTTTTCTTTGCTGATGAAATTGTTGGAAATTATGATAAAGGATGTTCTTTCAGTATAGTG
GTTCCTCTTGTTTCTACTGCTTATACGCAACTGTGGGACGCAACTCTAAAGCTGCAGGAG
GCTGTGAATGAGGGGTTTGAAGTGGATTATAGTGATGCCTCAGGTGGCTGTTTGGCTTGT
CAAGATTCAGGAGGGATATGTGAATTTGATATCGAGTTTCGTTGTCGTTGTGGAGATACA
ACTTTTCCTTTTACCTGTCCAGTTAATGTAAAGTCAGTTTTGATGCAACCAAACACTAAT
TTAGCAAGAAAGATTCATTTTCTCAAGTTGACAACAGGAATTTCGGTTGCTGGAATTGGG
ATGTTAATCTTCTTTGGAATTATGTATACACAATATAGAAAATCATTCAAGAAGTGCATA
AGATTAATTAACGGCGAAACAGAAGATCAGAGTCTAGAGGCCTTACTTAAGCAATATGGA
TCACTGGCAACAAAGAGATACAGCTATAAGGAAATCAAGAAAATGACACATGGATTCAAC
GATAAGCTTGGTGAAGGAGGTTATGGAGGGGTCTACAAAGGTATTCTTGCTAACGGCCGA
GTTGTTGCAGTAAAGATTCTGAAAGCAACTAAAGGTGATGGAGAAGAATTTATCAATGAG
GTCGCGAGCATCAGTCAAACTTCCCATGTCAACGTCGTGTCTCTTTTGGGATATTGTCTT
GATGGGAGCAAAAGAGCTCTTATTTATGACTTCATGCCAAATGGATCCCTAGAGAAATAC
ATTTATGGTAATGGCTCTCACTTGGGACTGCACAGATTGTATCAAATTGCAGTTGGAATT
GCTAAAGGATTGGAGTATCTGCACCGGGGATGCAACACAAGAATTTTGCATTTTGACATA
AAGCCTCATAACATACTCCTTGATGAGGAATTCTGTCCTAAAATATCAGATTTTGGTTTG
GCTAAACTCTGCACAAGGAAAGAAAGCATTGTATCTATGTTAGGAGCACGAGGGACGATT
GGTTATATTGCTCCTGAAGTCATCAGTAGGAGTTTTGGAGGAGTCTCACACAAGTCTGAT
GTCTATAGTTATGGAATGATGGTTTTAGAAATGGTCGGAGGAAGAAAAAATGTGAAAGAA
GAAGTAAGCCATACAAGTGAGATATATTTTCCTTACTGGGCGTATCAGCACGTTCAGCTA
GACGATGAGCTGAAACTACAAGGGATTATAAACAAAGAAGAAGAAGAAGAAACTGCAAGG
AAGATGATATTAGTAGGACTGTGGTGCATACAAACCGATCCAGCAGTAAGGCCATCGATG
AGCAAAGTTATTGACATGTTAGAAGGTAATTTGACCTTACAAGTACCACCAAAACCTTTA
TTATGTACTCCTTATTGTTCAGGAAGACATTCTTTGAGCGCGCGAGGAATGCCCCTCAAC
GCCTCCTTGATTTCTCCTTCAAGTTCAGCTCTTAGTTCTCTTGAAGCATCTGCTATTTTA
TAG

Peptide Sequence

PEP ID

XP_016479560.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Nicotiana tabacum]
Sequence

MVMLFLYQLSTCFLLILVITIPSSYSFLFEGESINCEAAYNCGNIHGIKYPFWGGSVRSR
LCGRDDYFLECKDNLSTLPVFSFSQRKYSGYRPSKFHVLSINESSTRMRIVHDNLWHNVC
PKSSSLFNLNKYNTTLINGLRYVPGTRFINIFYGCNPEVLSQVQLPSNINCSVVGTTNTG
VFFADEIVGNYDKGCSFSIVVPLVSTAYTQLWDATLKLQEAVNEGFEVDYSDASGGCLAC
QDSGGICEFDIEFRCRCGDTTFPFTCPVNVKSVLMQPNTNLARKIHFLKLTTGISVAGIG
MLIFFGIMYTQYRKSFKKCIRLINGETEDQSLEALLKQYGSLATKRYSYKEIKKMTHGFN
DKLGEGGYGGVYKGILANGRVVAVKILKATKGDGEEFINEVASISQTSHVNVVSLLGYCL
DGSKRALIYDFMPNGSLEKYIYGNGSHLGLHRLYQIAVGIAKGLEYLHRGCNTRILHFDI
KPHNILLDEEFCPKISDFGLAKLCTRKESIVSMLGARGTIGYIAPEVISRSFGGVSHKSD
VYSYGMMVLEMVGGRKNVKEEVSHTSEIYFPYWAYQHVQLDDELKLQGIINKEEEEETAR
KMILVGLWCIQTDPAVRPSMSKVIDMLEGNLTLQVPPKPLLCTPYCSGRHSLSARGMPLN
ASLISPSSSALSSLEASAIL

Transcript Sequence

Gene sequence data has not been registered.